BigSolDB 2.0: New Solubility Data Resource for Cheminformatics

Edited by: user2@asd.asd user2@asd.asd

Researchers have introduced BigSolDB 2.0, a comprehensive dataset designed to advance cheminformatics by providing extensive organic compound solubility data. This new release aims to tackle the persistent challenge of accurately predicting solubility, a property critical for applications in chemistry, materials science, and pharmaceuticals.

The BigSolDB 2.0 dataset features 103,944 experimental solubility values for 1,448 distinct organic compounds across 213 solvents. Measurements were taken over a broad temperature range of 243 to 425 Kelvin and were meticulously extracted from 1,595 peer-reviewed scientific articles, ensuring high reliability. The dataset is presented in a machine-readable format with standardized molecular structures and solubility data, complemented by a web-based tool for intuitive visualization and searching.

Historically, predicting solubility in solvents other than water has been a significant hurdle in cheminformatics due to the scarcity of extensive and varied datasets. BigSolDB 2.0 addresses this limitation by offering a robust benchmark for developing and validating machine learning models for solubility prediction. The researchers note that the dataset's comprehensive nature is ideal for training and refining predictive algorithms, which could accelerate the discovery of new materials and pharmaceuticals.

The availability of such a large, standardized dataset is expected to empower researchers to develop more accurate and generalizable predictive models. This advancement has the potential to streamline the drug development process, as poor solubility is a common impediment, affecting an estimated 70% to 90% of new chemical entities in development pipelines. By providing a solid foundation for computational modeling, BigSolDB 2.0 facilitates more efficient and effective scientific exploration across multiple disciplines.

Sources

  • Nature

  • BigSolDB 2.0: a dataset of solubility values for organic compounds in organic solvents and water at various temperatures

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